Drupal Based Science Related Sites, Applications or Modules

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This is a reference list of sites and/or applications and/or modules (Drupal based) that are related to science. Please feel free to expand and refine as appropriate. There is a companion page for non-Drupal science sites and applications that are relevant to open-source applications for science; please post non-Drupal sites and applications there.

Type URL Version Description
Install Profile Drupal Ecological Information Management System (DEIMS) D7

An installation profile for storing, editing, and sharing data and information about your biological and ecological research. DEIMS provides user-friendly forms to describe all contextual information about your data. DEIMS produces automatically Ecological Metadata Language to share your records with other networks and metadata clearinghouses such as the ORNL-DAAC and the Knowledge Network for Biocomplexity. DEIMS allows you to query external databases using the Data Explorer feature.

A list of the features packed in DEIMS

  • Adaptive theme.
  • Data Explorer.
  • Faceted Search.
  • User friendly forms.
  • Controlled vocabularies.
  • Unit dictionary.
  • Web Services (Ecological Metadata Language, Biological Data Profile, ISO).
  • Provenance Aware System Tracking Architecture - compliant.
  • Publication management (biblio).
  • File downloads tracking.
  • Geo-references.
  • Google Analytics.
  • Slider (flex)
  • .. and all the power Drupal delivers!

There are numerous web sites that use this install profile (search Google for DEIMS)

Websites NASA Science on Drupal Central D7 NASA is using Drupal as the basis for many of their earth science related web sites and this is an effort to centralize support for those as well as other related research and university web sites that are related to the NASA mission.
Proprietary Install BioRAFT D7 Commercial package that "is a research management system. It provides an integrated portal and reliable framework for scientific research management, compliance oversight, and productivity solutions. Foremost, BioRAFT decreases total costs of ownership and operations and reduces institutional risk. " - From their website
Install Profile Tripal D6, D7, D9 in progress Toolkit for construction of online biological (genetics, genomics, breeding, etc), community database, and a member of the GMOD family of tools
Group of Modules MyLabBook D7, D8 Group of modules for Laboratory Informatics
Group of Modules UH-ESRM D8 Modules and other development for Environmental Sampling Research Module, funded by NSF grant for 2017-2022.
Module Barcode D7 Barcode module that could be useful when creating a Laboratory Information Management System (LIMS).
Module DataOne D7 A Drupal module that provides a stub for implementing the DataONE Member Node API.
Module D.A.I.L. D7 Collection of Drupal Artificial Intelligence Libraries.
Module MathJAX: LaTeX for Drupal D7,D8,D9 Module to display equations in nice format
Module Spectra Analytics D8,D9 Targeting a self-hosted analytics server which can be used as a platform for
monitoring programs like Zeomine Server Monitor, to build server monitoring dashboards. Also to decouple reports from the application
Module Wiris for Drupal D6,D7,D8,D9 Add-in for CKEditor and TinyMCE that allows you to edit equations and chemical formulas
Website Stembook D6 Social Network based on Science Collaboration Framework, Stem Book is an open access collection of invited, original, peer-reviewed chapters covering a range of topics related to stem cell biology written by top researchers in the field at the Harvard Stem Cell Institute and worldwide. Stem Book is aimed at stem cell and non-specialist researchers.
Website BugGuide.net D6 An online community of naturalists who enjoy learning about and sharing observations of insects, spiders, and other related creatures. Associated with (built by?) John Van Dyke, author of the popular Pro Drupal Development books.

Comments

Wow, a wonderful summary!

fishfree's picture

Wow, a wonderful summary!

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